ARID3A: Difference between revisions

ARID3A
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	2KK0, 4LJX
Identifiers
Aliases	ARID3A, BRIGHT, DRIL1, DRIL3, E2FBP1, AT-rich interaction domain 3A
External IDs	OMIM: 603265; MGI: 1328360; HomoloGene: 124247; GeneCards: ARID3A; OMA:ARID3A - orthologs
Gene location (Human)
Chr.	Chromosome 19 (human)
End	975,939 bp
Gene location (Mouse)
Chr.	Chromosome 10 (mouse)
End	79,790,852 bp
RNA expression pattern
	Top expressed in
	monocyte; ; blood; ; placenta; ; bone marrow cells; ; left testis; ; right testis; ; stromal cell of endometrium; ; buccal mucosa cell; ; granulocyte; ; sural nerve;
	Top expressed in
	ovarian follicle; ; granulocyte; ; tibiofemoral joint; ; tail of embryo; ; yolk sac; ; germinal epithelium; ; gastrula; ; genital tubercle; ; ovarian follicle; ; placenta;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	protein homodimerization activity; DNA binding; protein binding; chromatin binding; DNA-binding transcription factor activity; RNA polymerase II transcription regulatory region sequence-specific DNA binding; DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription factor activity, RNA polymerase II-specific;
Cellular component	membrane raft; nucleus; nucleoplasm; cytoplasm; cytosol; intracellular membrane-bounded organelle;
Biological process	positive regulation of transcription by RNA polymerase II; transcription, DNA-templated; regulation of transcription, DNA-templated; transcription by RNA polymerase II; DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest;
	Sources:Amigo / QuickGO
Orthologs
	1820
	13496
	ENSG00000116017
	ENSMUSG00000019564
	Q99856
	Q62431
	NM_005224
	NM_001288625; NM_001288626; NM_007880
	NP_005215
	NP_001275554; NP_001275555; NP_031906
	Wikidata
View/Edit Human	View/Edit Mouse

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Revision as of 10:47, 11 June 2008

Template:PBB Controls

AT rich interactive domain 3A (BRIGHT-like), also known as ARID3A, is a human gene.^[5]

Template:PBB Summary

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000116017 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000019564 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Entrez Gene: ARID3A AT rich interactive domain 3A (BRIGHT-like)".

External links

ARID3A+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article on a gene on human chromosome 19 is a stub. You can help Wikipedia by expanding it.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000116017 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000019564 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: ARID3A AT rich interactive domain 3A (BRIGHT-like)".

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 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Kortschak RD, Tucker PW, Saint R |title=ARID proteins come in from the desert. |journal=Trends Biochem. Sci. |volume=25 |issue= 6 |pages= 294-9 |year= 2000 |pmid= 10838570 |doi=  }}
+*{{cite journal  | author=Kortschak RD, Tucker PW, Saint R |title=ARID proteins come in from the desert. |journal=Trends Biochem. Sci. |volume=25 |issue= 6 |pages= 294–9 |year= 2000 |pmid= 10838570 |doi=  }}
-*{{cite journal  | author=Kortschak RD, Reimann H, Zimmer M, ''et al.'' |title=The human dead ringer/bright homolog, DRIL1: cDNA cloning, gene structure, and mapping to D19S886, a marker on 19p13.3 that is strictly linked to the Peutz-Jeghers syndrome. |journal=Genomics |volume=51 |issue= 2 |pages= 288-92 |year= 1998 |pmid= 9722953 |doi= 10.1006/geno.1998.5259 }}
+*{{cite journal  | author=Kortschak RD, Reimann H, Zimmer M, ''et al.'' |title=The human dead ringer/bright homolog, DRIL1: cDNA cloning, gene structure, and mapping to D19S886, a marker on 19p13.3 that is strictly linked to the Peutz-Jeghers syndrome. |journal=Genomics |volume=51 |issue= 2 |pages= 288–92 |year= 1998 |pmid= 9722953 |doi= 10.1006/geno.1998.5259 }}
-*{{cite journal  | author=Suzuki M, Okuyama S, Okamoto S, ''et al.'' |title=A novel E2F binding protein with Myc-type HLH motif stimulates E2F-dependent transcription by forming a heterodimer. |journal=Oncogene |volume=17 |issue= 7 |pages= 853-65 |year= 1998 |pmid= 9780002 |doi= 10.1038/sj.onc.1202163 }}
+*{{cite journal  | author=Suzuki M, Okuyama S, Okamoto S, ''et al.'' |title=A novel E2F binding protein with Myc-type HLH motif stimulates E2F-dependent transcription by forming a heterodimer. |journal=Oncogene |volume=17 |issue= 7 |pages= 853–65 |year= 1998 |pmid= 9780002 |doi= 10.1038/sj.onc.1202163 }}
-*{{cite journal  | author=Peeper DS, Shvarts A, Brummelkamp T, ''et al.'' |title=A functional screen identifies hDRIL1 as an oncogene that rescues RAS-induced senescence. |journal=Nat. Cell Biol. |volume=4 |issue= 2 |pages= 148-53 |year= 2002 |pmid= 11812999 |doi= 10.1038/ncb742 }}
+*{{cite journal  | author=Peeper DS, Shvarts A, Brummelkamp T, ''et al.'' |title=A functional screen identifies hDRIL1 as an oncogene that rescues RAS-induced senescence. |journal=Nat. Cell Biol. |volume=4 |issue= 2 |pages= 148–53 |year= 2002 |pmid= 11812999 |doi= 10.1038/ncb742 }}
-*{{cite journal  | author=Kaiwen M |title=[Involvement of E2FBP1, an ARID family member protein, in the p53 regulatory pathway] |journal=Kokubyo Gakkai Zasshi |volume=69 |issue= 2 |pages= 152-61 |year= 2002 |pmid= 12136662 |doi=  }}
+*{{cite journal  | author=Kaiwen M |title=[Involvement of E2FBP1, an ARID family member protein, in the p53 regulatory pathway] |journal=Kokubyo Gakkai Zasshi |volume=69 |issue= 2 |pages= 152–61 |year= 2002 |pmid= 12136662 |doi=  }}
-*{{cite journal  | author=Goebel P, Montalbano A, Ayers N, ''et al.'' |title=High frequency of matrix attachment regions and cut-like protein x/CCAAT-displacement protein and B cell regulator of IgH transcription binding sites flanking Ig V region genes. |journal=J. Immunol. |volume=169 |issue= 5 |pages= 2477-87 |year= 2002 |pmid= 12193717 |doi=  }}
+*{{cite journal  | author=Goebel P, Montalbano A, Ayers N, ''et al.'' |title=High frequency of matrix attachment regions and cut-like protein x/CCAAT-displacement protein and B cell regulator of IgH transcription binding sites flanking Ig V region genes. |journal=J. Immunol. |volume=169 |issue= 5 |pages= 2477–87 |year= 2002 |pmid= 12193717 |doi=  }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
-*{{cite journal  | author=Ma K, Araki K, Ichwan SJ, ''et al.'' |title=E2FBP1/DRIL1, an AT-rich interaction domain-family transcription factor, is regulated by p53. |journal=Mol. Cancer Res. |volume=1 |issue= 6 |pages= 438-44 |year= 2004 |pmid= 12692263 |doi=  }}
+*{{cite journal  | author=Ma K, Araki K, Ichwan SJ, ''et al.'' |title=E2FBP1/DRIL1, an AT-rich interaction domain-family transcription factor, is regulated by p53. |journal=Mol. Cancer Res. |volume=1 |issue= 6 |pages= 438–44 |year= 2004 |pmid= 12692263 |doi=  }}
-*{{cite journal  | author=Fukuyo Y, Mogi K, Tsunematsu Y, Nakajima T |title=E2FBP1/hDril1 modulates cell growth through downregulation of promyelocytic leukemia bodies. |journal=Cell Death Differ. |volume=11 |issue= 7 |pages= 747-59 |year= 2005 |pmid= 15017387 |doi= 10.1038/sj.cdd.4401412 }}
+*{{cite journal  | author=Fukuyo Y, Mogi K, Tsunematsu Y, Nakajima T |title=E2FBP1/hDril1 modulates cell growth through downregulation of promyelocytic leukemia bodies. |journal=Cell Death Differ. |volume=11 |issue= 7 |pages= 747–59 |year= 2005 |pmid= 15017387 |doi= 10.1038/sj.cdd.4401412 }}
-*{{cite journal  | author=Grimwood J, Gordon LA, Olsen A, ''et al.'' |title=The DNA sequence and biology of human chromosome 19. |journal=Nature |volume=428 |issue= 6982 |pages= 529-35 |year= 2004 |pmid= 15057824 |doi= 10.1038/nature02399 }}
+*{{cite journal  | author=Grimwood J, Gordon LA, Olsen A, ''et al.'' |title=The DNA sequence and biology of human chromosome 19. |journal=Nature |volume=428 |issue= 6982 |pages= 529–35 |year= 2004 |pmid= 15057824 |doi= 10.1038/nature02399 }}
-*{{cite journal  | author=Nixon JC, Rajaiya JB, Ayers N, ''et al.'' |title=The transcription factor, Bright, is not expressed in all human B lymphocyte subpopulations. |journal=Cell. Immunol. |volume=228 |issue= 1 |pages= 42-53 |year= 2004 |pmid= 15203319 |doi= 10.1016/j.cellimm.2004.03.004 }}
+*{{cite journal  | author=Nixon JC, Rajaiya JB, Ayers N, ''et al.'' |title=The transcription factor, Bright, is not expressed in all human B lymphocyte subpopulations. |journal=Cell. Immunol. |volume=228 |issue= 1 |pages= 42–53 |year= 2004 |pmid= 15203319 |doi= 10.1016/j.cellimm.2004.03.004 }}
-*{{cite journal  | author=Rajaiya J, Nixon JC, Ayers N, ''et al.'' |title=Induction of immunoglobulin heavy-chain transcription through the transcription factor Bright requires TFII-I. |journal=Mol. Cell. Biol. |volume=26 |issue= 12 |pages= 4758-68 |year= 2006 |pmid= 16738337 |doi= 10.1128/MCB.02009-05 }}
+*{{cite journal  | author=Rajaiya J, Nixon JC, Ayers N, ''et al.'' |title=Induction of immunoglobulin heavy-chain transcription through the transcription factor Bright requires TFII-I. |journal=Mol. Cell. Biol. |volume=26 |issue= 12 |pages= 4758–68 |year= 2006 |pmid= 16738337 |doi= 10.1128/MCB.02009-05 }}
-*{{cite journal  | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635-48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
+*{{cite journal  | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635–48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
 *{{cite journal  | author=Lin D, Ippolito GC, Zong RT, ''et al.'' |title=Bright/ARID3A contributes to chromatin accessibility of the immunoglobulin heavy chain enhancer. |journal=Mol. Cancer |volume=6 |issue=  |pages= 23 |year= 2007 |pmid= 17386101 |doi= 10.1186/1476-4598-6-23 }}
 }}

Revision as of 10:47, 11 June 2008

References

Further reading

External links